Job Description P0ACU2 Confidence 75.38% Date Thu Jan 5 11:19:03 GMT 2012 Rank 301 Aligned Residues 74 % Identity 16% Template d1xsva_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like Resolution 1.70

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	.	.	.	.	.	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A	A	I	K	E	Y	I	R	L	K
Query Conservation																																											.	.	.	.	.
Alig confidence																																											.	.	.	.	.
Template Conservation
Template Sequence		R	N	Y	L	E	L	F	Y	L	E	D	Y	S	L	S	E	I	A	D	T	F	N	V	S	R	Q	A	V	Y	D	N	I	R	R	T	G	D	L	V	E	D	Y	E	K	K	L	E	L	Y	Q	K	F	E	Q	R	R	E	I	Y	D	E	X	K	Q	H	L	S	N	P	E	Q	I	Q	R	Y	I	Q	Q	L
Template Known Secondary structure										T	S											T	T																																									T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions