Job Description P0ACU2 Confidence 99.91% Date Thu Jan 5 11:19:03 GMT 2012 Rank 11 Aligned Residues 186 % Identity 19% Template c3ppbB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative tetr family transcription regulator; PDBTitle: crystal structure of a putative tetr family transcription regulator2 (shew_3104) from shewanella sp. pv-4 at 2.10 a resolution Resolution 2.10 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	.	R	E	D	F	A	P	L	A	A	I	K	E
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		T	K	K	Q	A	I	L	E	T	A	L	Q	L	F	V	S	Q	G	F	H	G	T	S	T	A	T	I	A	R	E	A	G	V	A	T	G	T	L	F	H	H	F	P	S	K	E	Q	L	L	E	Q	L	F	L	G	V	K	Q	E	F	A	D	A	I	Q	A	S	V	S	S	R	G	D	L	K	Q	D	A	E	Q
Template Known Secondary structure																		T		S	T	T	S										T											S	S																							T					S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y	A	D	F
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		L	W	F	A	A	L	T	W	A	X	A	N	P	L	K	Q	A	F	.	F	Q	L	Y	S	X	S	P	T	V	E	Q	S	V	R	D	Q	A	X	H	G	I	L	G	F	I	A	E	L	I	R	Q	G	Q	A	S	G	E	L	A	E	Y	P	I	E	L	X	Q	D	N	C	H	G	Q	Y	L	A	A	T	R	Y
Template Known Secondary structure																				.					T	T	S	T	T	S											T	T	T													T	T	S	B			S
Template Predicted Secondary structure																				.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I	R	P	R
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.
Template Sequence		F	V	D	.	.	.	.	.	.	.	.	H	P	E	R	W	Q	Q	A	H	E	R	S	A	S	F	A	L	F	W	N	A	X	A	V	R
Template Known Secondary structure					.	.	.	.	.	.	.	.	S	G	G	G	G	G																	B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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