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Job DescriptionP0ACU2
Confidence99.79%DateThu Jan 5 11:19:03 GMT 2012
Rank98Aligned Residues174
% Identity14%Templatec3nxcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:hth-type protein slma; PDBTitle: molecular mechanism by which the escherichia coli nucleoid occlusion2 factor, slma, keeps cytokinesis in check
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.... .....90.......
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Query Sequence  KKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAF. REDFAPLAAIKEY
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Template Sequence  RREEILQSLALML. . . . . ESITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLI
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  IRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFA
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Template Sequence  VLLLLGFGERNPGLTRILT. . . . . GHARLQGRINQLFERIEAQLRQVLREKRMREGGYATDETLLASQILAFCEGMLSRF
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   106...110.........120.... .....130.........140.........150.........160.........170.........180
 
   178.180.........190.........200.........210
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Query Sequence  PQVEAVTGATLRDEVFFNQTVENVQRIIIEGIR
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Template Sequence  VR. . . . . . . . SEFKYRPTDDFDARWPLIAAQLQ
Template Known Secondary structure  T........TTT
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   188. 190.........200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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