Job Description P0ACU2 Confidence 99.74% Date Thu Jan 5 11:19:03 GMT 2012 Rank 113 Aligned Residues 149 % Identity 16% Template c3ni7A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:bacterial regulatory proteins, tetr family; PDBTitle: crystal structure of the tetr transcriptional regulator from2 nitrosomonas europaea atcc 19718 Resolution 2.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	.	R	E	D	F	A	P	L	A	A	I	K
Query Conservation																																																																						.
Alig confidence																																																																						.
Template Conservation
Template Sequence		D	P	X	R	D	A	I	V	D	T	A	V	E	L	A	A	H	T	S	W	E	A	V	R	L	Y	D	I	A	A	R	L	A	V	S	L	D	E	I	R	L	Y	F	R	E	K	D	E	L	I	D	A	W	F	D	R	A	D	S	R	X	L	K	E	A	E	S	A	G	F	L	D	L	V	A	S	E	R	I	H
Template Known Secondary structure																			S		S	T	T										T	T	S										S	S																				T	T	S	T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.
Template Sequence		H	L	I	X	I	W	L	D	A	L	A	V	Q	R	K	V	T	R	Q	X	I	X	S	K	L	E	H	I	H	I	Q	I	.	.	.	.	.	.	.	.	.	P	A	V	X	R	V	S	R	T	V	Q	W	V	R	E	A	A	Q	R	A	L	E	E	S	T	L	T	T	I	Y	L	X	T	F	F	F	W	X
Template Known Secondary structure													T	T											S									.	.	.	.	.	.	.	.	.																	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.										.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions