Job Description P0ACU2 Confidence 99.61% Date Thu Jan 5 11:19:03 GMT 2012 Rank 123 Aligned Residues 136 % Identity 12% Template c3ljlB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator luxt; PDBTitle: the crystal structure of the full-length transcriptional regulator2 luxt from vibrio parahaemolyticus rimd 2210633. Resolution 3.20 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	A	V	S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	D	T	E	I	T	I	Q	K	I	X	D	A	V	V	D	Q	L	L	R	L	G	Y	D	K	X	S	Y	T	T	L	S	Q	Q	T	G	V	S	R	T	G	I	S	H	H	F	P	K	K	T	D	F	T	A	A	L	D	G	R	I	F	K	X	F	I	E	H	L	E	F	E	K	G	L	D	A	F	S	Q
Template Known Secondary structure																							T														S	S											S	S	T									T							G	G	G				S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	K	E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		S	W	I	K	A	L	E	D	S	E	F	L	A	I	.	.	L	R	L	L	F	H	H	I	V	T	S	E	S	A	H	E	F	A	A	N	G	I	D	R	L	Y	K	X	V	E	S	Q	F	G	S	G	G	D	K	E	L	E
Template Known Secondary structure							T	T								.	.												S	S																					G	G	G
Template Predicted Secondary structure																.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions