Job Description P0ACU2 Confidence 99.87% Date Thu Jan 5 11:19:03 GMT 2012 Rank 51 Aligned Residues 180 % Identity 18% Template c3he0A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the structure of a putative transcriptional regulator tetr family2 protein from vibrio parahaemolyticus. Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	.	R	E	D	F	A	P	L	A	A	I	K	E
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		D	K	R	D	Q	I	L	A	A	A	E	Q	L	I	A	E	S	G	F	Q	G	L	S	X	Q	K	L	A	N	E	A	G	V	A	A	G	T	I	Y	R	Y	F	S	D	K	E	H	L	L	E	E	V	R	L	N	V	A	K	R	I	A	S	A	V	Q	A	G	V	N	D	D	X	P	L	K	E	R	Y	R	T
Template Known Secondary structure																				T	T	T											T	S							T	T		S	S																					T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y	A	D	F
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		X	W	L	N	I	W	N	L	A	G	S	N	L	N	A	I	S	N	R	V	.	.	.	.	.	L	P	C	T	T	R	N	K	T	W	E	L	E	R	K	X	F	A	Q	V	D	R	L	F	N	Q	G	K	E	E	G	V	F	K	P	L	D	N	E	V	L	S	G	L	S	F	E	A	S	V	A	L	A	R	K
Template Known Secondary structure									T	T	T	S							T	T		.	.	.	.	.																T	T													T	T		B		S										T
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E
Query Conservation
Alig confidence			.	.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		H	.	.	.	.	.	A	L	G	F	Y	Q	L	D	D	D	A	L	E	A	A	I	E	A	S	W	D	A	I	I	K
Template Known Secondary structure			.	.	.	.	.		T	T	S																				B
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		167						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions