Job Description P0ACU2 Confidence 99.91% Date Thu Jan 5 11:19:03 GMT 2012 Rank 13 Aligned Residues 180 % Identity 22% Template c3dcfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator of the tetr/acrr PDBTitle: crystal structure of transcriptional regulator of the2 tetr/acrr family (yp_290855.1) from thermobifida fusca yx-3 er1 at 2.50 a resolution Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	.	R	E	D	F	A	P	L	A	A	I	K	E
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		D	R	R	T	Q	I	I	K	V	A	T	E	L	F	R	E	K	G	Y	Y	A	T	S	L	D	D	I	A	D	R	I	G	F	T	K	P	A	I	Y	Y	Y	F	K	S	K	E	D	V	L	F	A	I	V	N	S	I	V	D	E	A	L	E	R	F	H	A	I	A	A	G	P	G	S	P	G	E	R	I	H	A
Template Known Secondary structure																		T		T	T	T											T											S	S																									T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y	A	D	F
Query Conservation
Alig confidence																						.	.	.	.																																																						.	.	.
Template Conservation																						.	.	.	.																																																						.	.	.
Template Sequence		L	L	V	E	H	T	R	T	I	L	R	N	L	D	A	N	T	L	F	Y	.	.	.	.	N	L	S	P	E	R	E	R	E	X	R	K	R	E	R	E	Y	T	E	I	X	Q	R	L	Y	A	E	G	V	A	T	G	E	L	L	D	V	D	P	T	V	A	T	A	T	L	L	G	A	A	I	W	T	.	.	.
Template Known Secondary structure													S									.	.	.	.																															T	T	S	S			S															T		.	.	.
Template Predicted Secondary structure																						.	.	.	.																																																						.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I	R
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	Y	R	W	Y	D	P	E	G	R	L	S	A	D	E	V	V	E	Q	I	T	R	L	L	L	N	G	Y	R
Template Known Secondary structure		.	.	.	.	.	.						T	T	S	S	S																	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions