Job Description P0ACU2 Confidence 99.84% Date Thu Jan 5 11:19:03 GMT 2012 Rank 75 Aligned Residues 168 % Identity 13% Template c3colB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of putative transcription regulator from2 lactobacillus plantarum Resolution 2.10 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	.	.	.	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A	A	I	K
Query Conservation																																																													.	.	.
Alig confidence																																																													.	.	.
Template Conservation
Template Sequence		K	Q	V	K	I	Q	D	A	V	A	A	I	I	L	A	E	G	P	A	G	V	S	T	T	K	V	A	K	R	V	G	I	A	Q	S	N	V	Y	L	Y	F	K	N	K	Q	A	L	I	D	S	V	Y	A	R	E	T	N	R	I	L	S	T	T	D	L	D	R	L	S	D	S	T	I	D	V	T	T	R	I	R
Template Known Secondary structure																			G	G	G											T	S							T	T			S																	S									T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y	A	D
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	V	Q	Q	V	Y	D	Y	S	L	A	N	P	D	S	L	T	I	I	Q	Q	I	K	A	L	N	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	V	A	N	L	L	T	A	A	I	D	A	K	V	I	K	Q	L	P	V	S	L	H	X	G	V	V	F	S	T	I	H	T	H	T	T
Template Known Secondary structure														S	T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	S	B		S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.															.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		N	I	.	.	.	.	.	S	K	G	R	Y	A	Q	D	Q	Y	T	F	G	D	I	F	Q	X	I	W	D	A	X
Template Known Secondary structure				.	.	.	.	.		T	T	S	S		T	T	S	S
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		166	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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