Job Description P0ACU2 Confidence 99.84% Date Thu Jan 5 11:19:03 GMT 2012 Rank 74 Aligned Residues 183 % Identity 23% Template c3cdlA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator aefr; PDBTitle: crystal structure of a tetr family transcriptional regulator from2 pseudomonas syringae pv. tomato str. dc3000 Resolution 2.36 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A	A	I	K	E
Query Conservation
Alig confidence																																																															.	.	.
Template Conservation																																																															.	.	.
Template Sequence		D	Q	K	R	E	S	I	V	Q	A	A	I	A	E	F	G	D	R	G	F	E	I	T	S	X	D	R	I	A	A	R	A	E	V	S	K	R	T	V	Y	N	H	F	P	S	K	E	E	L	F	A	E	X	L	Q	R	L	W	N	C	A	.	.	.	E	V	V	Y	R	P	L	V	S	L	R	E	Q	L	L	E
Template Known Secondary structure																					T	T	T										T	T	S							T	T	S	S	S															T		.	.	.			S			T	T	S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y	A	D	F
Query Conservation
Alig confidence																							.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		L	L	W	G	K	X	R	N	L	T	D	S	S	F	L	D	L	A	R	V	V	.	.	.	.	.	V	G	A	T	I	H	S	P	E	R	A	Q	V	W	L	E	E	T	F	S	A	W	I	R	A	A	Q	K	D	G	R	L	K	P	V	D	P	G	F	A	A	T	Q	X	H	A	L	L	K	S	F	A	F	W
Template Known Secondary structure											T												.	.	.	.	.						S						T	T																T	T		B		S																			T
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I	R
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		P	Q	V	.	.	.	T	F	N	A	A	L	L	T	P	Q	E	Q	S	N	V	V	E	S	A	L	N	X	F	L	G	W	Y	E
Template Known Secondary structure					.	.	.																												B
Template Predicted Secondary structure					.	.	.
Template SS confidence
		167	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions