Job Description P0ACU2 Confidence 99.83% Date Thu Jan 5 11:19:03 GMT 2012 Rank 80 Aligned Residues 173 % Identity 17% Template c3b81A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, acrr family; PDBTitle: crystal structure of predicted dna-binding transcriptional regulator2 of tetr/acrr family (np_350189.1) from clostridium acetobutylicum at3 2.10 a resolution Resolution 2.10 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		A	V	S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	.	R	E	D	F	A	P	L	A	A
Query Conservation																																																																								.
Alig confidence																																																																								.
Template Conservation
Template Sequence		N	F	N	N	K	R	T	E	L	A	N	K	I	W	D	I	F	I	A	N	G	Y	E	N	T	T	L	A	F	I	I	N	K	L	G	I	S	K	G	A	L	Y	H	Y	F	S	S	K	E	E	C	A	D	A	A	I	E	N	R	V	A	F	F	S	N	E	V	L	K	E	S	E	E	G	L	N	S	I	E	R
Template Known Secondary structure																							S	T	T											T								T	T		S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	K	I	L	L	A	G	I	I	N	S	P	S	N	K	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	K	L	X	V	A	I	I	K	Y	F	A	P	I	Y	A	D	I	I	S	Q	G	N	E	E	G	V	F	K	V	K	Y	P	L	E	T	A	E	I	I	L	T	L	S	H	F	Y
Template Known Secondary structure							T													.	.	.	.	.	.	.	.	.	.	.	.	.	.																											T	S				S															T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.															.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.
Template Sequence		L	D	E	D	L	F	.	.	.	.	.	.	.	.	K	W	K	K	E	D	X	S	L	K	L	T	A	F	K	E	T	L	I	K	I	L
Template Known Secondary structure		T						.	.	.	.	.	.	.	.	T			G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions