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Job Description | P0ACU2 | Confidence | 99.82% | Date | Thu Jan 5 11:19:03 GMT 2012 |
Rank | 86 | Aligned Residues | 151 |
% Identity | 15% | Template | c3aqsD_ |
PDB info |
PDB header:transcription regulator | Chain: D: PDB Molecule:bacterial regulatory proteins, tetr family; |
PDBTitle: crystal structure of rolr (ncgl1110) without ligand
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Resolution | 3.60 Å |
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19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | K | K | A | I | L | S | A | A | L | D | T | F | S | Q | F | G | F | H | G | T | R | L | E | Q | I | A | E | L | A | G | V | S | K | T | N | L | L | Y | Y | F | P | S | K | E | A | L | Y | I | A | V | L | R | Q | I | L | D | I | W | L | A | P | L | K | A | F | . |
R | E | D | F | A | P | L | A | A | I | K | E | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | R | A | R | L | I | T | S | A | R | T | L | M | A | E | R | G | V | D | N | V | G | I | A | E | I | T | E | G | A | N | I | G | T | G | T | F | Y | N | Y | F | P | D | R | E | Q | L | L | Q | A | V | A | E | D | A | F | E | S | V | G | I | A | L | D | Q | V | L | T | K | L | D | D | P | A | E | V | F | A | G | S |
Template Known Secondary structure |   |
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| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | G | G | G | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
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98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | R | L | K | L | E | V | S | R | D | Y | P | Q | A | S | R | L | F | C | M | E | M | L | A | G | A | P | L | L | M | D | E | L | T | G | D | L | K | A | L | I | D | E | K | S | A | L | I | A | G | W | V | K | S | G | K | L | A | P | I | D | P | Q | H | L | I | F | M | I | W | A | S | T | Q | H | Y | A | D | F | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | R | H | L | V | R | H | S | L | E | D | R | I | W | G | G | F | F | I | . |
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Q | M | G | A | A | H | P | V | L | M | R | I | L | G | P | R | A | R | R | D | L | L | H | G | L | E | T | G | R | F | T | I | E | D | L | D | L | A | T | T | C | T | F | G | S | L | I | A | A | I | Q | M | A |
Template Known Secondary structure |   |
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|  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
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130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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