Job Description P0ACU2 Confidence 99.91% Date Thu Jan 5 11:19:03 GMT 2012 Rank 19 Aligned Residues 183 % Identity 21% Template c2zb9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of tetr family transcription regulator2 sco0332 Resolution 2.25 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A	A
Query Conservation
Alig confidence																																																																				.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		R	P	A	E	E	V	R	A	E	V	L	H	A	V	G	E	L	L	L	T	E	G	T	A	Q	L	T	F	E	R	V	A	R	V	S	G	V	S	K	T	T	L	Y	K	W	W	P	S	K	G	A	L	A	L	D	G	Y	F	H	A	V	E	D	T	L	A	.	.	.	.	F	P	D	T	G	D	V	R	A	D
Template Known Secondary structure		S																						G	G	G																						S	S																			.	.	.	.				S	S
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																		.	.																																															.
Query SS confidence																		.	.																																															.
Query Sequence		I	K	E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	.	.	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	.	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T
Query Conservation																		.	.																																															.
Alig confidence																		.	.																																															.
Template Conservation
Template Sequence		L	L	A	Q	L	R	A	F	T	H	V	M	T	R	T	P	G	G	R	I	L	T	E	L	I	G	A	A	Q	T	D	A	D	L	A	T	A	Y	R	Q	L	Y	S	A	Q	R	R	A	L	A	A	E	R	L	R	H	A	R	E	L	G	Q	I	R	P	D	V	D	V	Q	V	L	V	D	Q	L	W	G	A	V
Template Known Secondary structure																S														T	T												T																		T	T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	Y	A	D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I	R	P	R
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	H	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	I	P	D	E	P	V	D	D	A	F	V	T	A	L	V	T	N	L	L	D	G	V	C	P	R
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	S		S	S																		S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.													180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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