Job Description P0ACU2 Confidence 99.91% Date Thu Jan 5 11:19:03 GMT 2012 Rank 9 Aligned Residues 190 % Identity 15% Template c2rasB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a putative tetr/acrr family transcriptional2 regulator (saro_0558) from novosphingobium aromaticivorans dsm at3 1.80 a resolution Resolution 1.80 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		V	S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	.	R	E	D	F	A	P	L	A	A	I
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		H	D	A	X	R	A	R	L	V	D	V	A	Q	A	I	V	E	E	R	G	G	A	G	L	T	L	S	E	L	A	A	R	A	G	I	S	Q	A	N	L	S	R	Y	F	E	T	R	E	D	L	X	E	A	I	A	D	Y	W	F	H	P	X	V	E	I	X	E	D	V	L	A	S	D	L	P	P	R	R	K	X
Template Known Secondary structure																						G	G	G											T	S							T	T		S	S												T	T													S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	F	F	A	R	R	F	V	V	X	R	R	K	W	E	A	D	P	V	K	L	Q	T	Y	I	E	V	G	N	D	Y	F	E	Q	V	R	S	Y	I	D	L	A	D	H	Y	L	G	E	I	I	G	E	A	X	S	D	G	A	F	S	G	L	E	V	D	E	T	I	S	L	V	N	Q	X	C	A	P	Y	C
Template Known Secondary structure																																																											T		S	T	T														S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I	R	P	R
Query Conservation
Alig confidence											.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		A	L	N	T	X	T	T	F	X	.	.	.	.	.	.	.	E	R	L	S	E	D	K	L	A	R	I	V	D	A	V	F	D	G	L	S	A	Q
Template Known Secondary structure										G	.	.	.	.	.	.	.	G	G																		S	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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