Job Description P0ACU2 Confidence 99.68% Date Thu Jan 5 11:19:03 GMT 2012 Rank 117 Aligned Residues 167 % Identity 18% Template c2qkoA_ PDB info PDB header:transcription Chain: A: PDB Molecule:possible transcriptional regulator, tetr family protein; PDBTitle: crystal structure of transcriptional regulator rha06399 from2 rhodococcus sp. rha1 Resolution 2.35 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A	A	I	K	E
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	R	R	A	A	L	V	N	A	A	I	E	V	L	A	R	E	G	A	R	G	L	T	F	R	A	V	D	V	E	A	N	V	P	K	G	T	A	S	N	Y	F	P	S	R	D	D	L	F	D	Q	V	G	K	R	I	H	E	R	L	.	.	.	.	.	.	.	.	.	.	.	.	N	L	E	L	A	I	E
Template Known Secondary structure																			T		T	T	T										S	S	S	T	T	T							S													G	G	G	T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.													.	.	.	.	70	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	.	.	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y	A
Query Conservation																					.	.
Alig confidence																					.	.																																		.	.	.	.	.	.																				.
Template Conservation																																																								.	.	.	.	.	.																				.
Template Sequence		Y	X	Q	G	L	F	G	R	I	T	R	D	R	T	G	Y	L	A	L	Q	E	L	R	L	E	A	V	R	R	P	E	L	R	T	T	L	T	R	T	I	S	E	N	L	K	R	D	I	G	F	H	L	D	S	.	.	.	.	.	.	G	L	P	G	D	R	S	T	V	L	X	L	Y	L	A	X	N	A	L	.
Template Known Secondary structure							T	T	T	T	T	T	T															T	T																											.	.	.	.	.	.	T		S																	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.																				.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	I	V	E	H	L	T	L	P	G	V	L	E	G	V	D	T	E	R	L	V	A	D	L	V	T	R	A	V
Template Known Secondary structure		.	.	.	.								G	G	G	S	T	T															S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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