Job Description P0ACU2 Confidence 99.86% Date Thu Jan 5 11:19:03 GMT 2012 Rank 58 Aligned Residues 180 % Identity 15% Template c2o7tA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a tetr family transcriptional regulator2 (ncgl1578, cgl1640) from corynebacterium glutamicum at 2.10 a3 resolution Resolution 2.10 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		R	A	V	S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	.	.	R	E	D	F	A	P	L
Query Conservation																																																																									.	.
Alig confidence																																																																									.	.
Template Conservation
Template Sequence		A	D	A	L	K	R	R	E	H	I	I	T	T	T	C	N	L	Y	R	T	H	H	H	D	S	L	T	X	E	N	I	A	E	Q	A	G	V	G	V	A	T	L	Y	R	N	F	P	D	R	F	T	L	D	X	A	C	A	Q	Y	L	F	N	V	V	I	S	L	Q	L	Q	A	I	S	T	F	P	T	D	P	E
Template Known Secondary structure																						S		G	G	G											T											S	S																											G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		A	A	I	K	E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	.	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T
Query Conservation																																																																		.
Alig confidence														.	.	.	.	.																																																.															.
Template Conservation														.	.	.	.	.																																																															.
Template Sequence		G	V	W	T	S	F	N	Q	L	L	F	D	.	.	.	.	.	R	G	L	G	S	L	V	P	A	L	A	P	E	S	L	D	D	L	P	D	E	V	S	A	L	R	R	T	T	E	K	N	T	T	T	L	I	N	L	A	K	Q	H	G	L	V	H	H	D	I	A	P	G	T	Y	I	V	G	L	I	T	I	.
Template Known Secondary structure														.	.	.	.	.	T	T											S	S	G	G	G	S																									T	T	S	S		T	T														.
Template Predicted Secondary structure														.	.	.	.	.																																																															.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	Y	A	D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I	R	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	R	P	P	I	T	A	L	A	T	I	S	E	N	S	H	K	A	L	L	G	L	Y	L	S	G	L	K	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T	S				G	G	G			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions