Job Description P0ACU2 Confidence 99.74% Date Thu Jan 5 11:19:03 GMT 2012 Rank 111 Aligned Residues 176 % Identity 12% Template c2iu5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type dhaklm operon transcriptional activator dhas; PDBTitle: dihydroxyacetone kinase operon activator dhas Resolution 1.6 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A	A
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.
Template Sequence		E	K	S	I	I	T	Q	K	I	I	A	K	A	F	K	D	L	M	Q	S	N	A	Y	H	Q	I	S	V	S	D	I	M	Q	T	A	K	I	R	R	Q	T	F	Y	N	Y	F	Q	N	Q	E	E	L	L	S	W	I	F	E	N	D	F	A	E	L	.	.	.	.	.	.	.	I	N	D	N	S	D	Y	Y	G
Template Known Secondary structure			T	T	S																	S		G	G	G											T	S		G	G	G	G	G	G	T		S	S																	.	.	.	.	.	.	.		T	S	S			S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y
Query Conservation
Alig confidence																																																				.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		W	Q	N	E	L	L	L	L	L	R	Y	L	D	E	N	Q	I	F	Y	Q	K	I	F	V	I	D	K	N	F	E	H	F	F	L	I	Q	W	E	N	L	L	D	K	V	I	F	D	Q	E	K	.	.	.	.	.	K	S	D	Y	H	W	S	D	L	E	K	S	F	I	C	R	Y	N	A	A	A	I	C	A	I
Template Known Secondary structure																T												T	T																							.	.	.	.	.		S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I	R	P
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	E	S	I	I	R	.	.	.	.	.	.	.	.	.	.	G	N	S	L	E	K	L	Y	S	Q	I	V	N	L	L	L	A	Q	I	K	I
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	T			S	G	G	G														T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.											.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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