Job Description P0ACU2 Confidence 99.86% Date Thu Jan 5 11:19:03 GMT 2012 Rank 63 Aligned Residues 186 % Identity 17% Template c2gfnA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator pksa related protein; PDBTitle: crystal structure of hth-type transcriptional regulator pksa related2 protein from rhodococcus sp. rha1 Resolution 1.90 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		A	V	S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	.	.	R	E	D	F	A	P	L	A
Query Conservation																																																																								.	.
Alig confidence																																																																								.	.
Template Conservation
Template Sequence		D	H	D	E	R	R	R	A	L	A	D	A	V	L	A	L	I	A	R	E	G	I	S	A	V	T	T	R	A	V	A	E	E	S	G	W	S	T	G	V	L	N	H	Y	F	G	S	R	H	E	L	L	L	A	A	L	R	R	A	G	D	I	Q	G	D	R	Y	R	T	I	L	D	E	E	G	A	G	P	I	E
Template Known Secondary structure																							G	G	G											S	S									T	S	S																									T		T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		A	I	K	E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	.	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q
Query Conservation																																																																	.
Alig confidence																																	.	.																															.
Template Conservation																																	.	.
Template Sequence		K	L	R	N	I	T	A	S	I	L	P	L	D	E	R	R	L	A	X	T	R	V	F	L	F	F	Y	A	E	G	T	.	.	A	R	G	E	I	A	A	F	L	A	R	W	R	G	V	V	R	E	S	V	V	A	A	Q	R	E	G	T	V	S	T	D	L	D	A	D	A	V	T	V	A	L	V	A	L	T	D
Template Known Secondary structure									T	T	S			S																			.	.		S																									T	S	S		T	T	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	A	D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		G	L	.	.	.	.	.	A	L	Q	A	I	L	D	P	V	V	X	K	A	I	S	A	E	D	A	A	A	R	C	V	D	A	A	V	R
Template Known Secondary structure				.	.	.	.	.					T	T									T	S	T	T											T
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		168	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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