Job Description P0ACU2 Confidence 99.67% Date Thu Jan 5 11:19:03 GMT 2012 Rank 118 Aligned Residues 175 % Identity 19% Template c2g7gA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rha04620, putative transcriptional regulator; PDBTitle: the crystal structure of the putative transcriptional regulator2 rha04620 from rhodococcus sp. rha1 Resolution 2.01 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A	A	I	K	E	Y	I
Query Conservation
Alig confidence																			.	.																																									.	.	.
Template Conservation																			.	.																																									.	.	.
Template Sequence		D	R	E	R	I	A	E	A	A	L	E	L	V	D	R	D	G	.	.	D	F	R	X	P	D	L	A	R	H	L	N	V	Q	V	S	S	I	Y	H	H	A	K	G	R	A	A	V	V	E	L	V	R	H	R	V	V	R	E	I	.	.	.	D	G	S	A	F	E	R	L	P	W	D	E	A	F	S	E	W	A
Template Known Secondary structure																		S	.	.	S										T	T	S							T	T	S																T	T		.	.	.			G	G	G	G	T	S
Template Predicted Secondary structure																			.	.																																									.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	Y	R	A	A	F	S	R	H	P	T	A	I	R	L	L	A	T	E	T	V	R	D	P	G	S	L	S	V	Y	H	S	A	A	A	G	L	R	G	A	G	F	P	D	D	H	I	X	A	V	I	T	A	A	E	N	F	L	L	G	A	A	L	D	A	A	A	P	E	V	X	I	E	A	D	S	T	T	T
Template Known Secondary structure										T		G	G	G						T	S																						T																										S		S								S		S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	M	I	W	A	S	T	Q	H	Y	A	D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I	R	P	R
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	A	L	T	R	A	L	A	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	G	P	E	R	A	E	Q	A	F	E	L	G	L	A	A	L	L	A	G	F	H	H	L
Template Known Secondary structure		S	S									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.															.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions