Job Description P0ACU2 Confidence 99.76% Date Thu Jan 5 11:19:03 GMT 2012 Rank 103 Aligned Residues 177 % Identity 14% Template c2fd5A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: the crystal structure of a transcriptional regulator from pseudomonas2 aeruginosa pao1 Resolution 1.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	A	V	S	A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	K	K	T	Q	T	R	A	R	I	L	G	A	A	T	Q	A	L	L	E	R	G	A	V	E	P	S	V	G	E	V	M	G	A	A	G	L	T	V	G	G	F	Y	A	H	F	Q	S	K	D	A	L	M	L	E	A	F	E	Q	L	L	G	K	R	R	E	L	L	G	E	L	D	P	G	L	S	G	K	E
Template Known Secondary structure																								T	T	T	S										T	T			G	G	G	G	G	G	T		S																							T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		A	I	K	E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	.	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q
Query Conservation																							.
Alig confidence																							.																																	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		R	R	A	L	A	A	A	F	Y	L	S	R	K	H	R	D	A	Q	V	D	A	G	C	P	L	P	A	T	L	A	E	V	A	R	L	P	E	G	F	R	E	V	L	S	R	H	V	E	I	M	V	T	S	L	.	.	.	.	.	.	.	.	A	E	S	P	E	E	T	D	V	A	L	A	D	L	V	L	M	I
Template Known Secondary structure											S						T	T		S	S	S			S					G	G	G	G	G	G	S																				.	.	.	.	.	.	.	.		S	S	G	G	G
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.									.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	A	D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.
Template Sequence		G	G	L	A	L	A	R	A	L	.	.	.	.	.	.	.	.	G	P	G	E	L	S	D	R	V	L	R	A	A	K	Q	A	V
Template Known Secondary structure											.	.	.	.	.	.	.	.		S	S													T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.									.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions