 |
Job Description | P0ACU2 | Confidence | 62.99% | Date | Thu Jan 5 11:19:03 GMT 2012 |
Rank | 390 | Aligned Residues | 60 |
% Identity | 13% | Template | c2dmnA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:homeobox protein tgif2lx; |
PDBTitle: the solution structure of the homeobox domain of human2 homeobox protein tgif2lx
|
Resolution | UNK |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | A | V | K | T | T | G | K | R | S | R | A | V | S | A | K | K | K | A | I | L | S | A | A | L | D | T | F | S | Q | F | G | . |
F | H | G | T | R | L | E | Q | I | A | E | L | A | G | V | S | K | T | N | L | L | Y | Y | F | P | S | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
| . |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |
Template Sequence |   |
G | S | S | G | S | S | G | K | K | R | K | G | N | L | P | A | E | S | V | K | I | L | R | D | W | M | Y | K | H | R | F | K | A | Y | P | S | E | E | E | K | Q | M | L | S | E | K | T | N | L | S | L | L | Q | I | S | N | W | F | I | N | A |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|