Job Description P0ACU2 Confidence 99.87% Date Thu Jan 5 11:19:03 GMT 2012 Rank 46 Aligned Residues 192 % Identity 21% Template c1zkgB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator, tetr family (tm1030)2 from thermotoga maritima at 2.30 a resolution Resolution 2.30 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		A	K	K	K	A	I	L	S	A	A	L	D	T	F	S	Q	F	G	F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	.	.	.	R	E	D	F	A	P	L	A	A	I
Query Conservation																																																																					.	.	.
Alig confidence																																																																					.	.	.
Template Conservation
Template Sequence		S	K	R	D	A	I	L	K	A	A	V	E	V	F	G	K	K	G	Y	D	R	A	T	T	D	E	I	A	E	K	A	G	V	A	K	G	L	I	F	H	Y	F	K	N	K	E	E	L	Y	Y	Q	A	Y	X	S	V	T	E	K	L	Q	K	E	F	E	N	F	L	X	K	N	R	N	R	D	I	F	D	F	X
Template Known Secondary structure																																	T	S									S	S	S																												T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		K	E	Y	I	R	L	K	L	E	V	S	R	D	Y	P	Q	A	S	R	L	F	C	M	E	M	L	A	G	A	P	L	L	M	D	E	L	T	G	D	L	K	A	L	I	D	E	K	S	A	L	I	A	G	W	V	K	S	G	K	L	A	.	P	I	D	P	Q	H	L	I	F	M	I	W	A	S	T	Q	H	Y
Query Conservation																																																															.
Alig confidence																				.																																											.
Template Conservation																				.
Template Sequence		E	R	W	I	E	K	K	L	E	Y	S	A	S	H	P	E	E	A	.	D	F	L	I	T	L	V	S	V	D	E	G	L	R	K	R	I	L	L	D	L	E	K	S	Q	R	V	F	F	D	F	V	R	E	K	L	K	D	L	D	L	A	E	D	V	T	E	E	I	A	L	K	F	L	X	W	F	F	S	G	F
Template Known Secondary structure																				.				G	G	G	T	T	S																												T	T	S		B		T	T
Template Predicted Secondary structure																				.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		A	D	F	A	P	Q	V	E	A	V	T	G	A	T	L	R	D	.	E	V	F	F	N	Q	T	V	E	N	V	Q	R	I	I	I	E	G	I	R
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		E	E	V	Y	L	R	T	Y	Q	G	K	P	E	L	L	K	R	D	X	N	T	L	V	E	E	V	K	V	X	L	R	I	L	K	K	G	X	T
Template Known Secondary structure										T	T																												B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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