 |
Job Description | P0ACU2 | Confidence | 89.75% | Date | Thu Jan 5 11:19:03 GMT 2012 |
Rank | 200 | Aligned Residues | 49 |
% Identity | 16% | Template | c1zgwA_ |
PDB info |
PDB header:transcription regulator/dna | Chain: A: PDB Molecule:ada polyprotein; |
PDBTitle: nmr structure of e. coli ada protein in complex with dna
|
Resolution | UNK |
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | R | S | R | A | V | S | A | K | K | K | A | I | L | S | A | A | L | D | T | F | S | Q | F | G | F | H | G | T | R | L | E | Q | I | A | E | L | A | G | V | S | K | T | N | L | L | Y | Y | F | P |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   | . | . |   |   |
|
|
|   |   |
|
|   |   |
|
|
|
|   |   |   |
|   |
|   |
|
|
Template Sequence |   |
Q | P | D | K | A | N | P | R | Q | H | R | L | D | K | I | T | H | A | C | R | L | L | E | Q | E | . |
. |
T | P | V | T | L | E | A | L | A | D | Q | V | A | M | S | P | F | H | L | H | R | L | F | K |
Template Known Secondary structure |   |
T | T | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . | . | S | S |
|
|
|  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|