Job Description P39298 Confidence 99.88% Date Thu Jan 5 11:59:04 GMT 2012 Rank 90 Aligned Residues 215 % Identity 14% Template c1ycdA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical 27.3 kda protein in aap1-smf2 PDBTitle: crystal structure of yeast fsh1/yhr049w, a member of the2 serine hydrolase family Resolution 1.70 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.														.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	P	C	V	I	F	Y	H	G	F	T	S	S	S	L	V	Y	S	Y	.	.	.	.	F	A	V	A	L	A	Q	A	G	L	R	V	I	M	P	D	A	P	D	H	G	S	R	F	S	G	D	A	A	R	R	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	W	Q	I	L	L	Q	S	M
Query Conservation																						.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	P	K	L	L	F	L	H	G	F	L	Q	N	G	K	V	F	S	E	K	S	S	G	I	R	K	L	L	K	K	A	N	V	Q	C	D	Y	I	D	A	P	V	L	L	E	K	K	D	L	P	F	E	M	D	D	E	K	W	Q	A	T	L	D	A	D	V	N	R	A	W	F	Y	H	S	E	I	S	H	E
Template Known Secondary structure												T	T										T										T	T									S					G	G	G		S	S													T	T					S	S				S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	F	T	T	L	R	A	A	I	A	E	E	N	W	L	L	D	D	R	L	A	V	G	G	A	S	M	G	A	M	T	A	L	G	I	T	A	R	H	P	T	V	R	C	T	A	S	M	M	G	S	G	Y	F	T	S	L	A	R	S	L	F	P	P	L	I	P	E	T	A	A	Q	Q	N	E	F	N	N	I
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	I	S	E	G	L	K	S	V	V	D	H	I	K	A	N	G	P	Y	D	G	I	V	G	L	S	Q	G	A	A	L	S	S	I	I	T	N	K	I	S	E	L	V	P	D	H	.	.	.	.	.	.	.	.	.	P	Q	F	K	V	S	V	V	I	S	G	Y	S	F	T	E	P	D	P	E	H	P	G	E
Template Known Secondary structure																						S						T																	S	T	T		.	.	.	.	.	.	.	.	.				S						S									T	T	S	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																		.																		.	.
Query SS confidence																																																		.																		.	.
Query Sequence		V	A	P	L	A	E	W	E	A	T	N	H	L	E	Q	L	S	D	R	P	L	L	L	W	H	G	L	D	D	D	V	V	P	A	D	E	S	L	R	L	Q	Q	A	L	S	E	T	G	.	R	D	K	L	L	T	C	S	W	Q	P	G	V	R	H	R	I	.	.	T	P	E	A	L	D	A	A	V	T	F	F
Query Conservation																																																		.																		.	.
Alig confidence																																																		.																		.	.
Template Conservation
Template Sequence		L	R	I	T	E	K	F	R	D	S	F	A	V	K	P	D	M	K	T	K	M	I	F	I	Y	G	A	S	D	Q	A	V	P	S	V	R	S	K	Y	L	Y	D	I	Y	L	K	A	Q	N	G	N	K	E	K	V	L	A	Y	E	H	P	G	G	H	M	V	P	N	K	K	D	I	I	R	P	I	V	E	Q	I
Template Known Secondary structure						G	G	G	T	T	T	T				T	T											T	T		S	S	S																T	T	T		T	T	T							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		246	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	S	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions