90 c1ycdA_ Probab=99.88   E-value=2.4e-22  Score=133.97  Aligned_columns=215  Identities=14%

Q ss_pred             CCEEEEEECCCCCCHHHHHH----HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC-------------CCCCCCCHHH
Q ss_conf             63089996687888467899----999999879868893013323223454434432-------------2333310124
Q batch____        26 PLPCVIFYHGFTSSSLVYSY----FAVALAQAGLRVIMPDAPDHGSRFSGDAARRLN-------------QFWQILLQSM   88 (249)
Q Consensus        26 ~~P~vi~~HG~~~~~~~~~~----~~~~l~~~g~~v~~~~~~~~g~~~~~~~~~~~~-------------~~~~~~~~~~   88 (249)
                      ..|+||++||++++...+..    +.+.+++.||.|+++|.++++.+..........             ..........
T Consensus         2 ~~P~vL~lHG~~~s~~~~~~~~~~l~~~l~~~g~~vv~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (237)
T c1ycdA_           2 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHE   81 (237)
T ss_dssp             CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGG
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf             68889998589999899999999999999729978999408823677656554661335553100111122567662106


Q ss_pred             HHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCHHCCCCCCCCCCCCCCC
Q ss_conf             55567877665305878445788540355310123210244431068884156516777620000012222344544331
Q batch____        89 QEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTSLARSLFPPLIPETAAQQNEFNNI  168 (249)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~i~~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (249)
                      .+.......+......+..++++.|.|.|+..+..++..........         ........................
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~i~G~s~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
T c1ycdA_          82 LDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDH---------PQFKVSVVISGYSFTEPDPEHPGE  152 (237)
T ss_dssp             CCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTC---------CCCSEEEEESCCCCEEECTTSTTC
T ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC---------CCCCEEEECCCCCCCCCCCCCCCC
T ss_conf             76999999999850543671499850444027999998432222444---------445324203333445300023222


Q ss_pred             CCCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCC-CCCEEEEEEECCCCCCC--CHHHHHHHHHHH
Q ss_conf             000010001111101122432011145787049899999999999689-98418999987677865--989999999999
Q batch____       169 VAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETG-RDKLLTCSWQPGVRHRI--TPEALDAAVTFF  245 (249)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~~g~~H~~--~~~~~~~~~~fl  245 (249)
                      ..................+|+|++||++|.+||++.+++++++++..+ ...+.++..++++||.+  ..+..+++++||
T Consensus       153 ~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GH~vp~~~~~~~~i~~fl  232 (237)
T c1ycdA_         153 LRITEKFRDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNKKDIIRPIVEQI  232 (237)
T ss_dssp             EEECGGGTTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf             12444211222110047998899964689877889999999999861777777469998388985468989999999999


Q ss_pred             HHCC
Q ss_conf             8609
Q batch____       246 RQHL  249 (249)
Q Consensus       246 ~~~L  249 (249)
                      .+.|
T Consensus       233 ~~~L  236 (237)
T c1ycdA_         233 TSSL  236 (237)
T ss_dssp             HHHH
T ss_pred             HHHC
T ss_conf             9860