Job Description P0AB83 Confidence 99.95% Date Thu Jan 5 11:14:51 GMT 2012 Rank 19 Aligned Residues 153 % Identity 20% Template d2noha1 SCOP info DNA-glycosylase DNA-glycosylase DNA repair glycosylase, 2 C-terminal domains Resolution 2.01

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	F	E	L	L	I	A	V	L	L	S	A	Q	A	T	D	V	S	V	N	K	A	T	A	K	L	Y	P	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	P	A	A	M	L	E	L	G	V	E	G	V	K	T	Y	I	K	T	I	G	L	Y	N	S	K	A	E	N	I	I	K	T
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.							.
Template Conservation																																																														.	.	.							.
Template Sequence		D	P	I	E	C	L	F	S	F	I	C	S	S	N	N	N	I	A	R	I	T	G	M	V	E	R	L	C	Q	A	F	G	P	R	L	I	Q	L	D	D	V	T	Y	H	G	F	P	S	L	Q	A	L	A	G	P	E	V	E	A	H	.	.	.	L	R	K	L	G	L	.	G	Y	R	A	R	Y	V	S	A	S
Template Known Secondary structure												T	T	T	T	S																	S							T	T														S	T	T					.	.	.				T	T		.	T	T
Template Predicted Secondary structure																																																														.	.	.							.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.
		93	.	.	.	.	.	.	100	.	.											.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																															.																									.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																															.																									.	.	.	.	.
Query Sequence		C	R	I	L	L	E	Q	H	N	G	.	.	.	.	.	.	.	.	.	.	E	V	P	E	D	R	A	A	L	E	A	L	P	G	V	G	R	K	T	A	N	V	V	L	N	T	A	F	G	W	.	P	T	I	A	V	D	T	H	I	F	R	V	C	N	R	T	Q	F	A	P	G	K	N	V	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.	.																															.																									.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																															.																									.	.	.	.	.
Template Conservation
Template Sequence		A	R	A	I	L	E	E	Q	G	G	L	A	W	L	Q	Q	L	R	E	S	S	Y	E	E	A	H	K	A	L	C	I	L	P	G	V	G	T	Q	V	A	D	C	I	C	L	M	A	L	D	K	P	Q	A	V	P	V	D	V	H	M	W	H	I	A	Q	R	D	Y	S	W	H	P	T	T	S	Q	A	K	G	P
Template Known Secondary structure								T	S		S							T	T	T	S										T	T	S	T	T														S			T	T																					S	S	S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
							157	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure		.	.	.	.	.								.
Query SS confidence		.	.	.	.	.								.
Query Sequence		.	.	.	.	.	E	Q	V	E	E	K	L	.	L	K	V	V	P	A	E	F	K	V	D	C	H	H	W	L	I	L	H	G	R
Query Conservation		.	.	.	.	.								.
Alig confidence		.	.	.	.	.								.
Template Conservation
Template Sequence		S	P	Q	T	N	K	E	L	G	N	F	F	R	S	L	W	G	P	Y	A	G	W	A	A	A	V	L	F	S	A	D	L	R	Q
Template Known Secondary structure																			T	T														T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions