Job Description P0AB83 Confidence 99.96% Date Thu Jan 5 11:14:51 GMT 2012 Rank 16 Aligned Residues 150 % Identity 21% Template d1mpga1 SCOP info DNA-glycosylase DNA-glycosylase DNA repair glycosylase, 2 C-terminal domains Resolution 1.80

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	H	P	T	T	E	L	N	F	S	S	P	F	E	L	L	I	A	V	L	L	S	A	Q	A	T	D	V	S	V	N	K	A	T	A	K	L	Y	P	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	P	A	A	M	L	E	L	G	V	E	G	V	K	T	Y	I	K	T	I	G	L	Y	N	S
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																																			.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation								.																																																														.	.	.	.
Template Sequence		P	G	L	R	L	P	.	G	C	V	D	A	F	E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	.	.	.	.	K	A	L	G	M	P	L	K
Template Known Secondary structure		T	T					.			S												T	T	T	S																			B		S	S		T	T		B										T							.	.	.	.			T	T	S
Template Predicted Secondary structure								.																																																														.	.	.	.
Template SS confidence
		103	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																																		.						.
Query SS confidence																	.	.	.	.	.																																		.						.
Query Sequence		K	A	E	N	I	I	K	T	C	R	I	L	L	E	Q	.	.	.	.	.	H	N	G	E	V	P	E	D	R	A	A	L	E	A	L	P	G	V	G	R	K	T	A	N	V	V	L	N	T	A	F	G	W	.	P	T	I	A	V	.	D	T	H	I	F	R	V	C	N	R	T	Q	F	A	P	G	K	N	V	E
Query Conservation																	.	.	.	.	.																																		.						.
Alig confidence																	.	.	.	.	.																																		.						.												.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		R	A	E	A	L	I	H	L	A	N	A	A	L	E	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L	P	D	D	Y	L	I	K	Q	R	F	P	G	M	.	.	.	.	.	.	T	P	A
Template Known Secondary structure																T		S		S	S			S										T	T	S	T	T														S			S	S				T	T								S	T	T		.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	E	E	K	L	L	K	V	V	P	A	E	F	K	V	D	C	H	H	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	R	R	Y	A	E	R	W	K	P	W	R	S	Y	A	L	L	H	I	W
Template Known Secondary structure								G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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