Job Description P0AB83 Confidence 99.97% Date Thu Jan 5 11:14:51 GMT 2012 Rank 13 Aligned Residues 174 % Identity 18% Template c2yg8B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dna-3-methyladenine glycosidase ii, putative; PDBTitle: structure of an unusual 3-methyladenine dna glycosylase ii (2 alka) from deinococcus radiodurans Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		E	I	L	T	R	L	R	E	N	N	P	H	P	T	T	E	L	N	F	S	S	P	F	E	L	L	I	A	V	L	L	S	A	Q	A	T	D	V	S	V	N	K	A	T	A	K	L	Y	P	V	A	.	.	N	T	P	A	A	M	L	E	L	G	V	E	G	V	K	T	Y	I	K	T	I	G	L	Y	N	S	K
Query Conservation																																																					.	.
Alig confidence																																																					.	.															.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		P	V	L	A	Q	V	T	S	L	C	G	E	L	P	V	L	A	P	T	P	D	P	F	G	R	L	V	R	S	V	A	G	Q	Q	L	S	V	K	A	A	Q	A	I	Y	G	R	L	E	G	L	P	G	G	V	V	P	A	A	L	L	K	V	S	G	D	D	L	.	.	.	.	R	G	V	G	L	S	W	A	K
Template Known Secondary structure																					S													T	T	S														T	S	T	T		S						T	T	S						.	.	.	.			T	T
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																																		.						.
Query SS confidence																.	.	.	.	.	.	.																																		.						.
Query Sequence		A	E	N	I	I	K	T	C	R	I	L	L	E	Q	.	.	.	.	.	.	.	H	N	G	E	V	P	E	D	R	A	A	L	E	A	L	P	G	V	G	R	K	T	A	N	V	V	L	N	T	A	F	G	W	.	P	T	I	A	V	.	D	T	H	I	F	R	V	C	N	R	T	Q	F	A	P	G	K	N	V
Query Conservation																.	.	.	.	.	.	.																																		.						.
Alig confidence																.	.	.	.	.	.	.																																		.						.													.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		V	R	T	V	Q	A	A	A	A	A	A	V	S	G	Q	I	D	F	A	H	L	S	G	Q	P	D	E	L	V	I	A	E	L	V	Q	L	P	G	I	G	R	W	T	A	E	X	F	L	L	F	A	L	A	R	P	D	V	F	S	S	G	D	L	A	L	R	Q	G	V	E	R	L	Y	.	.	.	.	.	P	G
Template Known Secondary structure														T	T	S	S		G	G	G	G	G	G	S											T	S	T	T													T	S			S					T	T												S	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	E	E	K	L	L	K	V	V	P	A	E	F	K	V	D	C	H	H	W	L	I	L	H	G	R	Y	T	C	I	A	R	K	P
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		E	D	W	R	D	V	T	A	R	W	A	P	Y	R	S	L	A	S	R	Y	L	W	.	.	A	N	S	A	R	X	Q	A	G	G	A	P
Template Known Secondary structure		S								T	T	T	T											.	.								T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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