Job Description P0AB83 Confidence 93.85% Date Thu Jan 5 11:14:51 GMT 2012 Rank 28 Aligned Residues 78 % Identity 23% Template c2owoA_ PDB info PDB header:ligase/dna Chain: A: PDB Molecule:dna ligase; PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate Resolution 2.30 Å

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		48	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																										90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure														.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	A	T	A	K	L	Y	P	V	A	N	.	.	T	P	A	A	M	L	E	L	G	V	E	G	V	K	T	Y	I	K	T	I	G	L	Y	N	S	K	A	E	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	T	C	R	I	L	L	E	Q	H
Query Conservation														.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.
Template Sequence		D	K	I	I	D	Q	L	V	E	K	E	Y	V	H	T	P	A	D	L	F	K	L	T	A	G	K	L	T	G	L	.	.	.	E	R	M	G	P	K	S	A	Q	N	V	V	N	A	L	E	K	A	K	E	T	T	F	A	R	F	L	Y	A	L	G	I	R	E	V	G	E	A	T	A	A	G	L	A	A	Y	F
Template Known Secondary structure											T	T			S	S	G	G	G	G	G	T								T	S	.	.	.	T	T																	T	B										T	T		T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.				.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
		101				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		N	.	.	.	G	E	V	P	E	D	R	A	A	L	E	A	L	P	G	V	G	R	K	T	A	N	V	V	L	N	T
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		G	T	L	E	A	L	E	A	A	S	I	E	E	L	Q	K	V	P	D	V	G	I	V	V	A	S	H	V	H	N	F
Template Known Secondary structure			S						T							T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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