Job Description P0AB83 Confidence 88.93% Date Thu Jan 5 11:14:51 GMT 2012 Rank 48 Aligned Residues 63 % Identity 29% Template c2csdB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:topoisomerase v; PDBTitle: crystal structure of topoisomerase v (61 kda fragment) Resolution 2.90 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	T	A	K	L	Y	P	V	A	N	T	P	A	A	M	L	E	L	G	V	E	G	V	K	T	Y	I	K	T	I	G	L	Y	N	S	K	A	E	N	I	I	K	T	C	R	I	L	L	E	Q	H	N	G	E	V	P	E	D	R	A	A	L	E	A	L	P	G	V	G	R	K	T	A	N	V	V
Query Conservation
Alig confidence																																					.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	A	D	E	L	I	E	H	F	E	S	I	A	G	I	L	A	T	D	L	E	E	I	E	R	M	Y	E	E	G	R	L	S	E	.	.	E	A	Y	R	A	A	V	E	I	Q	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	L	T	K	K	E	G	V	G	R	K	T	A	E	R	L
Template Known Secondary structure													S							S											T	T	S	S			.	.														.	.	.	.	.	.	.	.	.	.	.	.				S	T	T			S	S
Template Predicted Secondary structure																																					.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.			400	.	.	.	.	.	.	.	.	.	410	.	.													.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions