Return to main results Retrieve Phyre Job Id

Job DescriptionP75677
Confidence6.49%DateThu Jan 5 12:12:54 GMT 2012
Rank23Aligned Residues44
% Identity14%Templatec2h7fX_
PDB info PDB header:isomerase/dnaChain: X: PDB Molecule:dna topoisomerase 1; PDBTitle: structure of variola topoisomerase covalently bound to dna
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30 .........40.........50.
Predicted Secondary structure 








....









Query SS confidence 






















. . . .




















Query Sequence  PPGPFTRRQAQAVTTTYSNITLE. . . . DDQGSHFRLVVRDTEGRMVWR
Query Conservation 
 
 


 

  
   
 

 

....



 






  

 



Alig confidence 






















....




















Template Conservation      
 

  






 



     
  







 

 





Template Sequence  NNPAYEVLQHVKIPTHLTDVVVYGQTWEEALTRLIFVGSDSKGRRQYF
Template Known Secondary structure  T
T



TT



TTS
TTS
Template Predicted Secondary structure 



























Template SS confidence 















































   24.....30.........40.........50.........60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions