Job Description P10903 Confidence 52.11% Date Thu Jan 5 11:32:22 GMT 2012 Rank 7 Aligned Residues 219 % Identity 13% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	I	T	D	W	R	P	E	D	P	A	F	W	Q	Q	R	G	Q	R	I	A	S	R	N	L	W	I	S	V	P	C	L	L	L	A	F	C	V	W	M	L	F	S	A	V	A	V	N	L	P	K	V	G	F	N	F	T	T	D	Q	L	F	M	L	T	A	L	P	S	V	S	G	A	L	L	R	V	P
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		Y	R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	.	.	.	.	.	.	.	.	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	.	.	.	.	.	.	.	.	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T
Template Known Secondary structure				T	T	G	G	G	G	T	T	T	S	S			.	.	.	.	.	.	.	.																						T	.	.	.	.	.	.	.	.	T	T	T		S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.									.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		92	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		Y	S	F	M	V	P	I	F	G	G	.	.	R	R	W	T	A	F	S	T	G	I	L	I	I	P	C	V	W	L	G	F	A	V	Q	D	T	S	T	P	Y	S	V	F	I	I	I	S	L	L	C	G	F	A	G	A	N	F	A	S	S	M	A	N	I	S	F	F	F	P	K	Q	K	Q	G	G	A	L	G	L
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L
Template Known Secondary structure									T	S	T	T											G	G	G						T	T	T	T	T	T	T		S																																				T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	G	L	G	N	M	G	V	S	V	M	Q	L	V	A	P	L	V	V	S	L	S	I	F	A	V	F	G	S	Q	G	V	K	Q	P	D	G	T	E	L	Y	L	A	N	A	S	W	I	W	V	P	F	L	A	I	F	T	I	A	A	W	F	G	M	N	D	L	A	T	S	K	A	S	I	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y	W	E	M	P	E	G	N
Template Known Secondary structure		T																																																			T	S	T	T	S					T	T	S	T	T		G	G	G	T	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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