Return to main results Retrieve Phyre Job Id

Job DescriptionP46849
Confidence7.28%DateThu Jan 5 12:04:20 GMT 2012
Rank41Aligned Residues40
% Identity20%Templated1qnaa1
SCOP infoTBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.........140.........150...
Predicted Secondary structure 















Query SS confidence 












































Query Sequence  LWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTT
Query Conservation 
 
   
  
 
 


    





   
 

 
  

      
Alig confidence 





..










...






















Template Conservation 


 

..








 
...    
   
   
 
 
  

  
Template Sequence  LIFASG. . KMVCTGAKSED. . . FSKMAARKYARIVQKLGFPAKFK
Template Known Secondary structure  TTS..SS...TT




Template Predicted Secondary structure 


..


...







Template SS confidence 












































   72..... ..80........ .90.........100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions