Job Description P46849 Confidence 100.00% Date Thu Jan 5 12:04:20 GMT 2012 Rank 3 Aligned Residues 239 % Identity 103% Template d1qmha2 SCOP info IF3-like EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC Resolution 2.1

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	A	L	D	G	A	Q	G	E	G	G	G	Q	I	L	R	S	A	L	S	L	S	M	I	T	G	Q	P	F	T	I	T	S	I	R	A	G	R	A	K	P	G	L	L	R	Q	H	L	T	A	V	K	A	A	T	E	I	C	G	A	T	V	E	G	A	E	L	G	S	Q	R	L	L	F	R	P	G	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	I	A	L	D	G	A	Q	G	E	G	G	G	Q	I	L	R	S	A	L	S	L	S	M	I	T	G	Q	P	F	T	I	T	S	I	R	A	G	R	A	K	P	G	L	L	R	Q	H	L	T	A	V	K	A	A	T	E	I	C	G	A	T	V	E	G	A	E	L	G	S	Q	R	L	L	F	R	P	G	T	V
Template Known Secondary structure							T	T	S	T	T		S																						S	T	T	T	T	S	S	S		S																	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	G	D	Y	R	F	A	I	G	S	A	G	S	C	T	L	V	L	Q	T	V	L	P	A	L	W	F	A	D	G	P	S	R	V	E	V	S	G	G	T	D	N	P	S	A	P	P	A	D	F	I	R	R	V	L	E	P	L	L	A	K	I	G	I	H	Q	Q	T	T	L	L	R	H	G	F	Y	P	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	G	D	Y	R	F	A	I	G	S	A	G	S	C	T	L	V	L	Q	T	V	L	P	A	L	W	F	A	D	G	P	S	R	V	E	V	S	G	G	T	D	N	P	S	A	P	P	A	D	F	I	R	R	V	L	E	P	L	L	A	K	I	G	I	H	Q	Q	T	T	L	L	R	H	G	F	Y	P	A	G
Template Known Secondary structure																												T	T	S	S	S											B	B	T	T	B			T						T								T	T												B	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	V	V	A	T	E	V	S	P	V	A	S	F	N	T	L	Q	L	G	E	R	G	N	I	V	Q	M	R	G	E	V	L	L	A	G	V	P	R	H	V	A	E	R	E	I	A	T	L	A	G	S	F	S	L	H	E	Q	N	I	H	N	L	P	R	D	Q	G	P	G	N	T	V	S	L	E	V	E	S	E
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	V	V	A	T	E	V	S	P	V	A	S	F	N	T	L	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S						B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	T	E	R	F	F	V	V	G	E	K	R	V	S	A	E	V	V	A	A	Q	L	V	K	E	V	K	R	Y	L	A	S	T	A	A	V	G	E	Y	L	A	D	Q	L	V	L	P	M	A	L	A	G	A	G	E	F	T	V	A	H	P	S	C	H	L	L	T	N	I	A	V	V	E	R	F	L	P	V	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	V	G	E	Y	L	A	D	Q	L	V	L	P	M	A	L	A	G	A	G	E	F	T	V	A	H	P	S	C	H	L	L	T	N	I	A	V	V	E	R	F	L	P	V	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T							S	S																S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																				184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	L	I	E	T	D	G	V	T	R	V	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	L	I	E	T	D	G	V	T	R	V	S	I
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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