 |
Job Description | P46849 | Confidence | 4.16% | Date | Thu Jan 5 12:04:20 GMT 2012 |
Rank | 55 | Aligned Residues | 32 |
% Identity | 16% | Template | d1qhda2 |
SCOP info | Viral protein domain
| Viral protein domain
| Top domain of virus capsid protein
|
Resolution | 1.95 |
|
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | C | G | A | T | V | E | G | A | E | L | G | S | Q | R | L | L | F | R | P | G | T | V | R | G | G | D | Y | R | F | A |
Query Conservation |   |
  |
|
|   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |
|
|   |
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |
|
|
Template Sequence |   |
R | F | S | F | P | R | V | I | T | S | A | D | G | A | T | T | W | Y | F | N | P | V | I | L | R | P | N | N | V | E | I | E |
Template Known Secondary structure |   |
G | G | S | S |
|  |  |  |  |
| T | T | S | S |
|  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|