 |
Job Description | P46849 | Confidence | 3.26% | Date | Thu Jan 5 12:04:20 GMT 2012 |
Rank | 79 | Aligned Residues | 34 |
% Identity | 18% | Template | d1nh2a2 |
SCOP info | TBP-like
| TATA-box binding protein-like
| TATA-box binding protein (TBP), C-terminal domain
|
Resolution | 1.90 |
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | W | F | A | D | G | P | S | R | V | E | V | S | G | G | T | D | N | P | S | A | P | P | A | D | F | I | R | R | V | L | E | P | L | L | A | K | I |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
| . | . |
|
|   |
|
|
|
|
|
|   |
| . | . | . |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
Template Sequence |   |
L | L | I | F | V | S | G | . |
. |
K | I | V | L | T | G | A | K | Q | R | E | . |
. |
. |
E | I | Y | Q | A | F | E | A | I | Y | P | V | L | S | E | F |
Template Known Secondary structure |   |
 |  |  |
| T | T | S | . | . |  |  |  |  |  |  |  | S | S |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
204 | . | . | . | . | . | 210 | |
|
. | . | . | . | . | . | . | . | . | 220 | . | |
|
|
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|