 |
Job Description | P46849 | Confidence | 6.67% | Date | Thu Jan 5 12:04:20 GMT 2012 |
Rank | 43 | Aligned Residues | 35 |
% Identity | 26% | Template | d1aisa1 |
SCOP info | TBP-like
| TATA-box binding protein-like
| TATA-box binding protein (TBP), C-terminal domain
|
Resolution | 2.10 |
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | W | F | A | D | G | P | S | R | V | E | V | S | G | G | T | D | N | P | S | A | P | P | A | D | F | I | R | R | V | L | E | P | L | L | A | K | I | G | I |
Query Conservation |   |
|   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |
|
|   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
| . | . |
|
|
|
|
|
|
|
|
|   |
| . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |
Template Sequence |   |
L | I | F | S | S | G | . |
. |
K | L | V | V | T | G | A | K | S | V | Q | . |
. |
. |
D | I | E | R | A | V | A | K | L | A | Q | K | L | K | S | I | G | V |
Template Known Secondary structure |   |
 |  |
| T | T | S | . | . |  |  |  |  |  |  |  | S | S |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
| . | . |  |  |  |  |  |  |  |
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
58 | . | 60 | . | . | . | |
|
. | . | . | . | . | . | 70 | . | . | . | . | |
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|