Return to main results Retrieve Phyre Job Id

Job DescriptionP46849
Confidence91.84%DateThu Jan 5 12:04:20 GMT 2012
Rank10Aligned Residues127
% Identity21%Templatec3roiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: 2.20 angstrom resolution structure of 3-phosphoshikimate 1-2 carboxyvinyltransferase (aroa) from coxiella burnetii
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40........ .50.........60.........70.........80.........90.
Predicted Secondary structure 













....












Query SS confidence 
































. . . .










































Query Sequence  GQILRSALSLSMITGQPFTITSIRAGRAKPGLL. . . . RQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFA
Query Conservation 




 




 





 
 


  
  


 .... 


  
 

  

     
   


 
 
 

 
 

     
Alig confidence 





















......




....









....




























Template Conservation 

  
 
  

        
 
......   
  


  
   
  
....

 
       
  
 
            
Template Sequence  GTAIRLLSGLLAGQPFNTVLTG. . . . . . DSSLQRRPMKRIIDPLTLM. . . . GAKIDSTGNVPPLKIYGNPRLTGIHYQLP
Template Known Secondary structure  TSSS
......
TTGGGS

T....T

STTSS


TT
B


S
Template Predicted Secondary structure 





......





....












Template SS confidence 















































































   95....100.........110...... ...120.........130..... ....140.........150.........160....
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  IGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEV
Query Conservation    




 
 

 


 
 
   
  
 
 


    





   
 

 
  

      
  


 
 




   
Alig confidence 


....




















.......







....












................



Template Conservation    
....

  
 




    
   
 .......     
  ....
   
   
  
 ................   
Template Sequence  MAS. . . . AQVKSCLLLAGLYARGKTCIT. . . . . . . EPAPSRDH. . . . TERLLKHFHYTLQ. . . . . . . . . . . . . . . . SICV
Template Known Secondary structure  S

....TTSBS.......
SS



....TT

B
................
Template Predicted Secondary structure 


....




.......




....



................
Template SS confidence 















































































   165.. ..170.........180........ .190...... ...200......... 210...
 
   172.......180...
Predicted Secondary structure 







Query SS confidence 











Query Sequence  SPVASFNTLQLG
Query Conservation   
   
  
 
 
Alig confidence 











Template Conservation   
          
Template Sequence  SGGGKLKANDIS
Template Known Secondary structure  TT


B


Template Predicted Secondary structure 






Template SS confidence 











   218.220.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions