|   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | I | L | R | S | A | L | S | L | S | M | I | T | G | Q | P | F | T | I | T | S | I | R | A | G | R | A | K | P | G | L | L | R | . |
. |
Q | H | L | T | A | V | K | A | A | T | E | I | C | G | A | T | V | E | G | A | E | L | G | S | Q | R | L | L | F | R | P | G | T | V | R | G | G | D | Y | R | F | A | I | G |
Query Conservation |   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |
|
|
|   |   | . | . |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |
|   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |
|   |   |
| . | . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | T | G | C | R | L | T | M | G | L | V | G | V | Y | D | F | D | S | T | F | I | . |
. |
. |
. |
G | D | A | S | L | T | K | R | P | M | G | R | V | L | N | P | L | R | E | M | . |
. |
. |
. |
G | V | Q | V | K | S | E | D | G | D | R | L | P | V | T | L | R | G | P | K | T | P | T | P | I | T | Y | R | V | P | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | S | S | S |  |  |  |  |  | . | . | . | . |
|
| T | T | G | G | G | S |
|
|  |  |  |  |  |  |  |  |  | T | . | . | . | . | T |
|  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |
|
| S | S |
|
|
|
|  |  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
|
|
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | G | S | C | T | L | V | L | Q | T | V | L | P | A | L | W | F | A | D | G | P | S | R | V | E | V | S | G | G | T | D | N | P | S | A | P | P | A | D | F | I | R | R | V | L | E | P | L | L | A | K | I | G | I | H | Q | Q | T | T | L | L | R | H | G | F | Y | P | A | G | G | G | V | V | A | T | E | V | S | P |
Query Conservation |   |
|
|
|
|
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|
|
|
|
|   |   |   |
|   |
|
Alig confidence |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
| . | . | . |
|
|   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |
|   |
|   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   | . | . | . | . |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |
|   |
|   |
|
Template Sequence |   |
A | S | . |
. |
. |
A | Q | V | K | S | A | V | L | L | A | G | L | N | T | P | G | I | T | T | V | I | . |
. |
. |
. |
. |
. |
. |
E | P | I | M | T | R | D | H | . |
. |
. |
. |
T | E | K | M | L | Q | G | F | G | A | N | L | T | V | E | T | D | A | D | G | V | R | . |
. |
. |
. |
. |
. |
. |
T | I | R | L | E | G |
Template Known Secondary structure |   |
S |
| . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |  | . | . | . | . | . | . | . |  | S | S |
|
|
|
|  | . | . | . | . |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| T | T | S |
|  | . | . | . | . | . | . | . |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | |
|
|
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 200 | . | . | |
|
|
|
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 230 |
  |
  |   |
174 | . | . | . | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | S | F | N | T | L | Q | L | G |
Query Conservation |   |
  |   |   |
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | G | K | L | T | G | Q | V | I | D |
Template Known Secondary structure |   |
T |
|
|
| B |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
231 | . | . | . | . | . | . | . | . | 240 |
  |