Return to main results Retrieve Phyre Job Id

Job DescriptionP46849
Confidence3.29%DateThu Jan 5 12:04:20 GMT 2012
Rank77Aligned Residues42
% Identity26%Templatec1d1rA_
PDB info PDB header:structural genomicsChain: A: PDB Molecule:hypothetical 11.4 kd protein ycih in pyrf-osmb PDBTitle: nmr solution structure of the product of the e. coli ycih2 gene.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.... .....50.........60. ........70.
Predicted Secondary structure 








......



.....



Query SS confidence 














. . . . . .
















. . . . .









Query Sequence  GQPFTITSIRAGRAK. . . . . . PGLLRQHLTAVKAATEI. . . . . CGATVEGAEL
Query Conservation 



 
 


  
  ......


  


  
 

  
.....
     
   
Alig confidence 














......
















.....









Template Conservation     
 
    
 
 

 

 
 

     
   
 
 


  





    
Template Sequence  DGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVI
Template Known Secondary structure 




SSSS





S
TTSSSS

B

SS
Template Predicted Secondary structure 























Template SS confidence 




















































   31........40.........50.........60.........70.........80...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions