Job Description P60340 Confidence 95.53% Date Thu Jan 5 12:06:43 GMT 2012 Rank 28 Aligned Residues 64 % Identity 23% Template d2apoa1 SCOP info PUA domain-like PUA domain-like PUA domain Resolution 1.95

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		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.										.	300	.	.		.	.	.	.	.	.	.	310	.
Predicted Secondary structure																							.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.					.										.	.
Query SS confidence																							.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.					.										.	.
Query Sequence		D	Y	P	V	V	N	L	P	L	T	S	S	V	Y	F	K	N	G	N	P	V	.	.	.	.	.	.	R	T	S	G	A	P	L	E	G	L	V	R	V	T	E	G	E	N	G	K	F	I	G	M	G	E	I	D	.	.	.	.	.	.	.	.	.	D	E	G	R	.	V	A	P	R	R	L	V	V	E	.	.
Query Conservation																							.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.					.										.	.
Alig confidence																							.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.					.										.	.
Template Conservation
Template Sequence		H	L	K	K	V	V	V	K	D	S	A	V	D	A	I	C	H	G	A	D	V	Y	V	R	G	I	A	K	L	S	K	G	I	G	K	G	E	T	V	L	V	E	T	L	K	G	E	A	V	A	V	G	K	A	L	M	N	T	K	E	I	L	N	A	D	K	G	V	A	V	D	V	E	R	V	Y	M	D	R	G
Template Known Secondary structure																		T	T					G	G	G						T	T			T	T								T	T	S									S	S									S	S	S										S		T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
			312	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Y	P
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	Y	P
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		327	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions