Job Description P60340 Confidence 97.53% Date Thu Jan 5 12:06:43 GMT 2012 Rank 21 Aligned Residues 87 % Identity 20% Template d1v9ka_ SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase RsuA/RluD Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.														.																									.	.												.	.
Query SS confidence																.	.	.	.	.	.	.														.																									.	.												.	.
Query Sequence		N	G	V	L	L	L	D	K	P	Q	G	M	S	S	.	.	.	.	.	.	.	N	D	A	L	Q	K	V	K	R	I	Y	N	A	.	N	R	A	G	H	T	G	A	L	D	P	L	A	T	G	M	L	P	I	C	L	G	E	A	.	.	T	K	F	S	Q	Y	L	L	D	S	D	.	.	K	R	Y	R	V	I
Query Conservation																.	.	.	.	.	.	.														.																									.	.												.	.
Alig confidence																.	.	.	.	.	.	.														.																									.	.												.	.
Template Conservation
Template Sequence		D	H	I	L	V	L	N	K	P	S	G	T	A	V	H	G	G	S	G	L	S	F	G	V	I	E	G	L	R	A	L	R	P	E	A	R	F	L	E	L	V	H	R	L	D	R	D	T	S	G	V	L	L	V	A	K	K	R	S	A	L	R	S	L	H	E	Q	L	R	E	K	G	X	Q	K	D	Y	L	A	L
Template Known Secondary structure		S	S								T	T	S		S	S			S	S	S												S	T	T		S					S	S				T	T									S	S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	G	Q	R	T	D	T	S	D	A	D	G	Q	I	V	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	G	Q	W	Q	S	H	V	K	S	V	Q	A	P	L	L	K	N
Template Known Secondary structure				S				T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions