Job Description P60340 Confidence 100.00% Date Thu Jan 5 12:06:43 GMT 2012 Rank 9 Aligned Residues 198 % Identity 37% Template d1sgva2 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase II TruB Resolution 1.90

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	V	L	L	L	D	K	P	Q	G	M	S	S	N	D	A	L	Q	K	V	K	R	I	Y	N	A	N	R	A	G	H	T	G	A	L	D	P	L	A	T	G	M	L	P	I	C	L	G	E	A	T	K	F	S	Q	Y	L	L	D	S	D	K	R	Y	R	V	I	A	R	L	G	Q	R	T	D	T	S	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	I	V	V	I	D	K	P	A	G	M	T	S	H	D	V	V	G	R	C	R	R	I	F	A	T	R	R	V	G	H	A	G	T	L	D	P	M	A	T	G	V	L	V	I	G	I	E	R	A	T	K	I	L	G	L	L	T	A	A	P	K	S	Y	A	A	T	I	R	L	G	Q	T	T	S	T	E	D	A
Template Known Secondary structure		S									T	T														T	T		S					S	S				T	T										G	G	G	G	G	G	G	G	G	T	T	T	S											T				T	T	S	B	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		D	G	Q	I	V	E	E	R	P	V	.	T	F	S	A	E	Q	L	A	A	A	L	D	T	F	R	G	D	I	E	Q	I	P	S	M	Y	S	A	L	K	Y	Q	G	K	K	L	Y	E	Y	A	R	Q	G	I	E	V	P	R	E	A	R	P	I	T	V	Y	E	L	L	F	I	R	H	E	G	N	E	L	E	L
Query Conservation												.
Alig confidence												.																								.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	Q	V	L	Q	S	V	P	A	K	H	L	T	I	E	A	I	D	A	A	M	E	R	L	R	G	E	I	L	E	A	R	P	.	.	.	.	I	R	I	D	R	F	E	L	L	A	A	R	R	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	I	D	I	D	V
Template Known Secondary structure		T	S									T	T													T										.	.	.	.															T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																				.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																					.	.	.	.	.	140	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	H	C	S	K	G	T	Y	I	R	T	I	I	D	D	L	G	E	K	L	G	C	G	A	H	V	I	Y	L	R	R	L	A	V	S	K	Y	P	V	E	R	M	V	T	L	E	H	L	R	E	L	V	E	Q	A	E	Q	Q	D	I	P	A	A	E	L	L	D	P	L	L	M	P	M	D	S	P	A
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	D	C	S	S	G	T	Y	I	R	A	L	A	R	D	L	G	D	A	L	G	V	G	G	H	V	T	A	L	R	R	T	R	V	G	R	F	E	L	D	Q	A	R	S	L	D	D	L	A	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	L	S	L	S	L	D	E	A	C
Template Known Secondary structure						S			T	T													T	S													T	T			G	G	G		B								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																.	.	.	.	.	.	.	.	230	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions