Job Description P60340 Confidence 97.47% Date Thu Jan 5 12:06:43 GMT 2012 Rank 22 Aligned Residues 72 % Identity 19% Template c3zv0D_ PDB info PDB header:cell cycle Chain: D: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1p-cbf5p complex Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.							.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.										.	300	.	.		.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.					.
Query SS confidence																																			.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.					.
Query Sequence		P	M	D	S	P	A	S	D	Y	P	V	V	N	L	P	L	T	S	S	V	Y	F	K	N	G	N	P	V	R	T	S	G	A	.	.	.	.	.	.	P	L	E	G	L	V	R	V	T	E	G	E	N	G	K	F	I	G	M	G	E	I	D	.	.	.	.	.	.	.	.	.	D	E	G	R	.	V	A	P	R
Query Conservation																																			.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.					.
Alig confidence																																			.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		P	L	E	T	L	L	V	G	Y	K	R	I	V	V	K	D	S	A	V	N	A	V	C	Y	G	A	K	L	M	I	P	G	L	L	R	Y	E	E	G	I	E	L	Y	D	E	I	V	L	I	T	T	K	G	E	A	I	A	V	A	I	A	Q	M	S	T	V	D	L	A	S	C	D	H	G	V	V	A	S	V	K
Template Known Secondary structure			G	G	G	G	G	T	T	S															T	T					G	G	G						T	T			T	T								T	T										S	S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		307	.	.	310	.				.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		R	L	V	V	E	.	.	.	Y	P	A
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		R	C	I	M	E	R	D	L	Y	P	R
Template Known Secondary structure					S		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions