Job Description P60340 Confidence 8.98% Date Thu Jan 5 12:06:43 GMT 2012 Rank 72 Aligned Residues 66 % Identity 15% Template c3kbgA_ PDB info PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s4e; PDBTitle: crystal structure of the 30s ribosomal protein s4e from2 thermoplasma acidophilum. northeast structural genomics3 consortium target tar28. Resolution 1.75 Å

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		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.																		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	M	D	S	P	A	S	D	Y	P	V	V	N	L	P	L	T	S	S	V	Y	F	K	N	G	N	P	V	R	T	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	L	E	G	L	V	R	V	T	E	G	E	N	G	K	F	I	G	M	G	E	I	D	D	E	G	R	V	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Template Conservation																																																						.
Template Sequence		V	T	L	L	S	I	I	R	D	Y	L	K	L	S	D	K	E	R	E	A	A	R	I	L	A	N	G	L	V	K	V	D	G	K	T	V	R	E	K	K	F	A	V	G	F	X	D	V	I	E	I	N	.	G	E	S	Y	R	V	V	Y	N	D	Q	G	A	L	V	L	X	K	E	T	K	E	R	A	S	X	K
Template Known Secondary structure														T	T	T		G	G	G							T	T					T	T						T	T					T	T						T	.	T									T	T	S									T	T	G	G	G
Template Predicted Secondary structure																																																						.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		305	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	K	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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