 |
Job Description | P60340 | Confidence | 74.15% | Date | Thu Jan 5 12:06:43 GMT 2012 |
Rank | 33 | Aligned Residues | 62 |
% Identity | 19% | Template | c3d79A_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:putative uncharacterized protein ph0734; |
PDBTitle: crystal structure of hypothetical protein ph0734.1 from2 hyperthermophilic archaea pyrococcus horikoshii ot3
|
Resolution | 1.73 Å |
|
 |
  |   |
236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | D | P | L | L | M | P | M | D | S | P | A | S | D | Y | P | V | V | N | L | P | L | T | S | S | V | Y | F | K | N | G | N | P | V | R | T | S | G | . |
. |
. |
. |
. |
. |
. |
A | P | L | E | G | L | V | R | V | T | E | G | E | N | G | K | F | I | G | M | G | E | I |
Query Conservation |   |
  |
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
Template Sequence |   |
I | A | L | Y | N | L | S | D | E | E | D | L | R | K | W | P | R | R | V | V | V | D | E | G | A | V | P | H | I | L | N | G | A | D | V | M | A | P | G | I | V | D | A | D | E | G | I | K | E | G | D | F | V | F | V | V | E | E | K | Y | G | R | P | L | A | I | G | I | A |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T | S |
| G | G | G | S | T | T |  |  |  |  |
| G | G | G |  |  |  |  |  | T | T |
|
|  |  | G | G | G |  |  |  |  |
| T | T |
|
| T | T |
|  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|