Job Description P60340 Confidence 34.43% Date Thu Jan 5 12:06:43 GMT 2012 Rank 46 Aligned Residues 79 % Identity 23% Template c2xzmW_ PDB info
PDB header: ribosomeChain: W: PDB Molecule: 40s ribosomal protein s4;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
Resolution 3.93 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
202 . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
R L A V S K Y P V E R M V T L E H L R E L V E Q A E Q Q D I P A A E L L D P L L M P M D S P A S D Y P V V N L P L T S S V Y F K N G .
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N P V R T S G .
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Query Conservation
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Alig confidence
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Template Conservation
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Template Sequence
R P S Q G P H K L R E S L P L S V L .
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L K E R L N Y A L N G R D V T L I L N D K E Q N V F V D G K V R R D
Template Known Secondary structure
S S S S S S S . . . . . . . . . . . . . . . . . . . . . . . . . . . . T T T T S S T T S T T T T
Template Predicted Secondary structure
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Template SS confidence
30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 .
275 . . . . 280 . . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
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A P L E G L V R V T E G E N G K F I G M G E I D D E G R V A P R R L
Query Conservation
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Alig confidence
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Template Conservation
Template Sequence
K G Y P T G L M D V V R I E K T D Q S F R I L Y D T K G R F V L K S L S K E E A K Y K L L K V
Template Known Secondary structure
T T T T G G G T S S S T T G G G
Template Predicted Secondary structure
Template SS confidence
82 . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
