Job Description P60340 Confidence 98.32% Date Thu Jan 5 12:06:43 GMT 2012 Rank 15 Aligned Residues 99 % Identity 17% Template c2v9kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uncharacterized protein flj32312; PDBTitle: crystal structure of human pus10, a novel pseudouridine2 synthase. Resolution 2.0 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	S	D	K	R	Y	R	V	I	A	R	L	G	Q	R	T	D	T	S	D	A	D	G	Q	I	V	E	E	R	P	V	T	F	S	A	E	Q	L	A	A	A	L	D	T	F	R	G	D	I	E	Q	I	P	S	M	Y	S	A	L	K	Y	Q	G	K	K	L	Y	E	Y	A	R	Q	G	I	E	V	P	R	E
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	K	T	K	T	Y	S	A	L	I	W	T	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	Q	K	K	D	I	E	F	L	N	D	I	K	D	L	K	I	D	Q	K	T	P	L	.	.	.	.	R	V	L	H	R	R	P	.	.	.	.	.	.	.	.	.	.	.	L	A
Template Known Secondary structure															S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G	G	G			S									G	.	.	.	.	G	G	T	T	T	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.																		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.					.	.	.	450	.	.	.												.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.
Query Sequence		A	R	P	I	T	V	Y	E	L	L	F	I	R	H	E	G	N	E	L	E	L	E	I	H	C	S	K	G	T	Y	I	R	T	I	I	D	.	.	.	.	.	.	.	.	D	L	G	E	K	L	G	C	G	A	H	V	I	Y	L
Query Conservation																																						.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	A	R	V	I	H	F	M	E	T	Q	Y	V	D	E	H	H	F	R	L	H	L	K	T	Q	A	G	T	Y	I	K	E	F	V	H	G	D	F	G	R	T	K	P	N	I	G	S	L	M	N	V	T	A	D	I	L	E	L
Template Known Secondary structure																	T	T										T	T										T	T	T	T			S							T	S
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions