Job Description P60340 Confidence 97.39% Date Thu Jan 5 12:06:43 GMT 2012 Rank 23 Aligned Residues 70 % Identity 17% Template c2i82D_ PDB info PDB header:lyase/rna Chain: D: PDB Molecule:ribosomal large subunit pseudouridine synthase a; PDBTitle: crystal structure of pseudouridine synthase rlua: indirect2 sequence readout through protein-induced rna structure Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80
Predicted Secondary structure																	.	.	.	.	.	.	.																																		.															.	.	.
Query SS confidence																	.	.	.	.	.	.	.																																		.															.	.	.
Query Sequence		N	G	V	L	L	L	D	K	P	Q	G	M	S	S	N	.	.	.	.	.	.	.	D	A	L	Q	K	V	K	R	I	Y	N	A	N	R	A	G	H	T	G	A	L	D	P	L	A	T	G	M	L	P	I	C	L	.	G	E	A	T	K	F	S	Q	Y	L	L	D	S	D	.	.	.	K	R	Y	R	V	I	A
Query Conservation																	.	.	.	.	.	.	.																																		.															.	.	.
Alig confidence																	.	.	.	.	.	.	.																																		.															.	.	.
Template Conservation
Template Sequence		D	H	I	X	V	V	N	K	P	S	G	L	L	S	V	P	G	R	L	E	E	H	K	D	S	V	X	T	R	I	Q	R	D	Y	P	Q	A	E	S	V	H	R	L	D	X	A	T	S	G	V	I	V	V	A	L	T	K	A	A	E	R	E	L	K	R	Q	F	R	E	R	E	P	K	K	Q	Y	V	A	R	V
Template Known Secondary structure		S	S								T	T	S	B	S	S			S	S	G	G	G			B						T	T	T	S	T	T				S	S				S	S									S	S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		921	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000
		81
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1001

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions