 |
Job Description | P60340 | Confidence | 37.17% | Date | Thu Jan 5 12:06:43 GMT 2012 |
Rank | 43 | Aligned Residues | 89 |
% Identity | 15% | Template | c2gagC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:heterotetrameric sarcosine oxidase gamma-subunit; |
PDBTitle: heteroteterameric sarcosine: structure of a diflavin metaloenzyme at2 1.85 a resolution
|
Resolution | 1.85 Å |
|
 |
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | Q | L | A | A | A | L | D | T | F | R | G | D | I | E | Q | I | P | S | M | Y | S | A | L | K | Y | Q | G | K | K | L | Y | E | Y | A | R | Q | G | I | E | V | P | R | E | A | R | P | I | T | V | Y | E | L | L | F | I | R | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | G | N | E | L | E | L | E | I | H | C |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |   |
|   |
|   |
|   |
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |
|   |
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|
|   |
|   |   |
Template Sequence |   |
G | G | V | L | S | A | A | L | G | D | A | P | G | Q | V | V | D | L | S | A | N | R | S | V | L | E | L | T | G | P | D | A | P | L | V | L | R | K | S | C | P | A | D | L | H | P | R | A | F | A | V | N | Q | A | I | V | T | S | V | A | N | I | P | V | L | L | W | R | T | G | E | Q | A | W | R | I | M | P | R | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |
| T | T | T | B |
|
|  |  |  |  | S | T | T |  |  |  |  |  | T | T | T |
|
| S |
|
| S | T | T | T | S |
| T | T | B |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | B | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | G | T | Y | I | R | T | I | I | D | D | L | G | E | K | L | G | C |
Query Conservation |   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |
Template Sequence |   |
S | F | T | E | H | T | V | H | W | L | V | D | A | M | S | E | F | A | S |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|