Return to main results Retrieve Phyre Job Id

Job DescriptionP60340
Confidence35.04%DateThu Jan 5 12:06:43 GMT 2012
Rank44Aligned Residues52
% Identity21%Templatec2frxD_
PDB info PDB header:transferaseChain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   250.........260.........270.........280.........290.........300....
Predicted Secondary structure 






















Query SS confidence 






















































Query Sequence  DYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDEGRVA
Query Conservation    
 
 
       
  
  
            
     
  


          
Alig confidence 



































..









.





Template Conservation        
       

 

 
        
  

  .. 
 


  
 . 
  

Template Sequence  NXNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTF. . QHQPIGLAKR. IGSRLK
Template Known Secondary structure  SSS

TT




SS

S
SS..SSS
.TTTT

Template Predicted Secondary structure 


















..

.


Template SS confidence 






















































   410.........420.........430.........440..... ....450..... ....460.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions